Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.42□□□□□ -0.42
Shisa3Q3UPR0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Gm5682-201ENSMUST00000173402 505 ntBASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Shisa3Q3UPR0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Gm13036-201ENSMUST00000117799 748 ntBASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Shisa3Q3UPR0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Shisa3Q3UPR0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Shisa3Q3UPR0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Shisa3Q3UPR0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms