Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Grk6-205ENSMUST00000224653 2976 ntBASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Cks1brtQ3UNC9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Trmt13-210ENSMUST00000198454 880 ntBASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Grk6-207ENSMUST00000225925 2769 ntBASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cks1brtQ3UNC9 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Mir1199-201ENSMUST00000117015 119 ntBASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.31□□□□□ -0.76
Cks1brtQ3UNC9 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms