Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Brf2Q3UAW9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Gm18737-201ENSMUST00000173594 937 ntBASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Gm8000-201ENSMUST00000188378 592 ntBASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Gm6443-201ENSMUST00000203599 874 ntBASIC13.54□□□□□ -0.24
Brf2Q3UAW9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf2Q3UAW9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 AW822252-206ENSMUST00000208904 237 ntBASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf2Q3UAW9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brf2Q3UAW9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brf2Q3UAW9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Brf2Q3UAW9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brf2Q3UAW9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brf2Q3UAW9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brf2Q3UAW9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brf2Q3UAW9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brf2Q3UAW9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brf2Q3UAW9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brf2Q3UAW9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
Brf2Q3UAW9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Brf2Q3UAW9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brf2Q3UAW9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brf2Q3UAW9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.52□□□□□ -0.25
Brf2Q3UAW9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.52□□□□□ -0.25
Brf2Q3UAW9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Brf2Q3UAW9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Brf2Q3UAW9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.52□□□□□ -0.25
Brf2Q3UAW9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.52□□□□□ -0.25
Brf2Q3UAW9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brf2Q3UAW9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.52□□□□□ -0.25
Brf2Q3UAW9 Gm5264-201ENSMUST00000190584 848 ntBASIC13.52□□□□□ -0.25
Brf2Q3UAW9 Gm20553-201ENSMUST00000204205 844 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms