Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col5a2Q3U962 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col5a2Q3U962 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Gm6152-201ENSMUST00000151704 340 ntBASIC16.82■□□□□ 0.28
Col5a2Q3U962 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Gm24420-201ENSMUST00000176676 59 ntBASIC16.82■□□□□ 0.28
Col5a2Q3U962 Gm38223-201ENSMUST00000194484 695 ntBASIC16.82■□□□□ 0.28
Col5a2Q3U962 Gm37466-201ENSMUST00000195692 652 ntBASIC16.82■□□□□ 0.28
Col5a2Q3U962 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.82■□□□□ 0.28
Col5a2Q3U962 Gm29705-201ENSMUST00000212598 474 ntBASIC16.82■□□□□ 0.28
Col5a2Q3U962 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a2Q3U962 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Gm27516-201ENSMUST00000184237 98 ntBASIC16.81■□□□□ 0.28
Col5a2Q3U962 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.81■□□□□ 0.28
Col5a2Q3U962 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.81■□□□□ 0.28
Col5a2Q3U962 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.81■□□□□ 0.28
Col5a2Q3U962 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a2Q3U962 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a2Q3U962 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Gm26083-201ENSMUST00000157904 193 ntBASIC16.8■□□□□ 0.28
Col5a2Q3U962 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Gm38266-201ENSMUST00000194931 421 ntBASIC16.8■□□□□ 0.28
Col5a2Q3U962 Gm45880-201ENSMUST00000213041 853 ntBASIC16.8■□□□□ 0.28
Col5a2Q3U962 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.8■□□□□ 0.28
Col5a2Q3U962 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.8■□□□□ 0.28
Col5a2Q3U962 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a2Q3U962 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Gm22323-201ENSMUST00000103832 109 ntBASIC16.8■□□□□ 0.28
Col5a2Q3U962 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.8■□□□□ 0.28
Col5a2Q3U962 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC16.8■□□□□ 0.28
Col5a2Q3U962 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.8■□□□□ 0.28
Col5a2Q3U962 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a2Q3U962 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a2Q3U962 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a2Q3U962 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms