Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vars2Q3U2A8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vars2Q3U2A8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vars2Q3U2A8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Vars2Q3U2A8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vars2Q3U2A8 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vars2Q3U2A8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vars2Q3U2A8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vars2Q3U2A8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Vars2Q3U2A8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Itm2b-204ENSMUST00000228637 783 ntBASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vars2Q3U2A8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Gm24447-201ENSMUST00000083977 338 ntBASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vars2Q3U2A8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vars2Q3U2A8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vars2Q3U2A8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vars2Q3U2A8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vars2Q3U2A8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Gm20482-202ENSMUST00000174729 825 ntBASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Gm4819-201ENSMUST00000182170 1009 ntBASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vars2Q3U2A8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Gm15370-201ENSMUST00000117158 253 ntBASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Gm13369-201ENSMUST00000119442 987 ntBASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Gm37986-201ENSMUST00000193285 383 ntBASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vars2Q3U2A8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms