Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.14□□□□□ -0.15
Q3KNL4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3KNL4 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Q3KNL4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3KNL4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3KNL4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3KNL4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3KNL4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3KNL4 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.14□□□□□ -0.15
Q3KNL4 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Q3KNL4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3KNL4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.13□□□□□ -0.15
Q3KNL4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Q3KNL4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Q3KNL4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
Q3KNL4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.13□□□□□ -0.15
Q3KNL4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.13□□□□□ -0.15
Q3KNL4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Q3KNL4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.13□□□□□ -0.15
Q3KNL4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.13□□□□□ -0.15
Q3KNL4 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.13□□□□□ -0.15
Q3KNL4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.13□□□□□ -0.15
Q3KNL4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.13□□□□□ -0.15
Q3KNL4 Gm2451-201ENSMUST00000199447 999 ntBASIC14.13□□□□□ -0.15
Q3KNL4 Gm10290-201ENSMUST00000200451 999 ntBASIC14.13□□□□□ -0.15
Q3KNL4 Gm2651-201ENSMUST00000203560 838 ntBASIC14.13□□□□□ -0.15
Q3KNL4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.13□□□□□ -0.15
Q3KNL4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.13□□□□□ -0.15
Q3KNL4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Q3KNL4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Q3KNL4 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Q3KNL4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Q3KNL4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3KNL4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Q3KNL4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Q3KNL4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Q3KNL4 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Q3KNL4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Q3KNL4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Q3KNL4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Q3KNL4 Gm12350-201ENSMUST00000121208 462 ntBASIC14.12□□□□□ -0.15
Q3KNL4 Gm13597-201ENSMUST00000121239 375 ntBASIC14.12□□□□□ -0.15
Q3KNL4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Q3KNL4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.12□□□□□ -0.15
Q3KNL4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Q3KNL4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.12□□□□□ -0.15
Q3KNL4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.12□□□□□ -0.15
Q3KNL4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.12□□□□□ -0.15
Q3KNL4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Q3KNL4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.12□□□□□ -0.15
Q3KNL4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Q3KNL4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Q3KNL4 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Q3KNL4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Q3KNL4 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms