Protein–RNA interactions for Protein: Q0P5V2

Sobp, Sine oculis-binding protein homolog, mousemouse

Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SobpQ0P5V2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.2■□□□□ 0.18
SobpQ0P5V2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.2■□□□□ 0.18
SobpQ0P5V2 Gm22614-201ENSMUST00000178300 165 ntBASIC16.2■□□□□ 0.18
SobpQ0P5V2 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SobpQ0P5V2 Gm18212-201ENSMUST00000211678 889 ntBASIC16.2■□□□□ 0.18
SobpQ0P5V2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SobpQ0P5V2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SobpQ0P5V2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SobpQ0P5V2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SobpQ0P5V2 Gm22042-201ENSMUST00000082989 165 ntBASIC16.2■□□□□ 0.18
SobpQ0P5V2 Gm26232-201ENSMUST00000083360 166 ntBASIC16.2■□□□□ 0.18
SobpQ0P5V2 Gm24136-201ENSMUST00000083374 165 ntBASIC16.2■□□□□ 0.18
SobpQ0P5V2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.2■□□□□ 0.18
SobpQ0P5V2 Gm26110-201ENSMUST00000083971 165 ntBASIC16.2■□□□□ 0.18
SobpQ0P5V2 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.2■□□□□ 0.18
SobpQ0P5V2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SobpQ0P5V2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SobpQ0P5V2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SobpQ0P5V2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SobpQ0P5V2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SobpQ0P5V2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.2■□□□□ 0.18
SobpQ0P5V2 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.2■□□□□ 0.18
SobpQ0P5V2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SobpQ0P5V2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Snord83b-201ENSMUST00000104546 94 ntBASIC16.19■□□□□ 0.18
SobpQ0P5V2 Gm12217-201ENSMUST00000118858 696 ntBASIC16.19■□□□□ 0.18
SobpQ0P5V2 Gm13385-201ENSMUST00000121089 220 ntBASIC16.19■□□□□ 0.18
SobpQ0P5V2 Gm27772-201ENSMUST00000184900 187 ntBASIC16.19■□□□□ 0.18
SobpQ0P5V2 Gm7467-201ENSMUST00000185173 652 ntBASIC16.19■□□□□ 0.18
SobpQ0P5V2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.19■□□□□ 0.18
SobpQ0P5V2 AC141438.2-201ENSMUST00000215068 271 ntBASIC16.19■□□□□ 0.18
SobpQ0P5V2 AC135114.1-201ENSMUST00000228682 270 ntBASIC16.19■□□□□ 0.18
SobpQ0P5V2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SobpQ0P5V2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Gm6023-201ENSMUST00000118217 606 ntBASIC16.18■□□□□ 0.18
SobpQ0P5V2 Gm11331-201ENSMUST00000119764 288 ntBASIC16.18■□□□□ 0.18
SobpQ0P5V2 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Gm3508-201ENSMUST00000186012 792 ntBASIC16.18■□□□□ 0.18
SobpQ0P5V2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.18■□□□□ 0.18
SobpQ0P5V2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SobpQ0P5V2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SobpQ0P5V2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SobpQ0P5V2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SobpQ0P5V2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SobpQ0P5V2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SobpQ0P5V2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SobpQ0P5V2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SobpQ0P5V2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
SobpQ0P5V2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SobpQ0P5V2 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SobpQ0P5V2 Gm12616-201ENSMUST00000118594 382 ntBASIC16.17■□□□□ 0.18
SobpQ0P5V2 Gm13369-201ENSMUST00000119442 987 ntBASIC16.17■□□□□ 0.18
SobpQ0P5V2 Gm8566-201ENSMUST00000120174 465 ntBASIC16.17■□□□□ 0.18
SobpQ0P5V2 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.17■□□□□ 0.18
SobpQ0P5V2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SobpQ0P5V2 Mir1943-201ENSMUST00000158276 73 ntBASIC16.17■□□□□ 0.18
SobpQ0P5V2 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms