Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Tff1Q08423 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Tff1Q08423 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Tff1Q08423 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Tff1Q08423 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Tff1Q08423 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.96□□□□□ -0.49
Tff1Q08423 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Tff1Q08423 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.96□□□□□ -0.49
Tff1Q08423 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.96□□□□□ -0.49
Tff1Q08423 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.96□□□□□ -0.49
Tff1Q08423 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.96□□□□□ -0.49
Tff1Q08423 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tff1Q08423 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tff1Q08423 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tff1Q08423 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.96□□□□□ -0.5
Tff1Q08423 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Tff1Q08423 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tff1Q08423 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Tff1Q08423 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Tff1Q08423 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tff1Q08423 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.95□□□□□ -0.5
Tff1Q08423 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Tff1Q08423 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.95□□□□□ -0.5
Tff1Q08423 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.95□□□□□ -0.5
Tff1Q08423 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Tff1Q08423 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.95□□□□□ -0.5
Tff1Q08423 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Tff1Q08423 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.95□□□□□ -0.5
Tff1Q08423 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.95□□□□□ -0.5
Tff1Q08423 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.95□□□□□ -0.5
Tff1Q08423 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.95□□□□□ -0.5
Tff1Q08423 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Tff1Q08423 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
Tff1Q08423 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tff1Q08423 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tff1Q08423 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.94□□□□□ -0.5
Tff1Q08423 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.94□□□□□ -0.5
Tff1Q08423 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.94□□□□□ -0.5
Tff1Q08423 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.94□□□□□ -0.5
Tff1Q08423 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.94□□□□□ -0.5
Tff1Q08423 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tff1Q08423 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms