Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim43cP86449 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim43cP86449 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trim43cP86449 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.63■□□□□ 0.09
Trim43cP86449 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim43cP86449 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim43cP86449 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim43cP86449 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.62■□□□□ 0.09
Trim43cP86449 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Gm6736-201ENSMUST00000166583 948 ntBASIC15.62■□□□□ 0.09
Trim43cP86449 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Gm5312-201ENSMUST00000203728 547 ntBASIC15.62■□□□□ 0.09
Trim43cP86449 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.62■□□□□ 0.09
Trim43cP86449 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.62■□□□□ 0.09
Trim43cP86449 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim43cP86449 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trim43cP86449 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.62■□□□□ 0.09
Trim43cP86449 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trim43cP86449 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.62■□□□□ 0.09
Trim43cP86449 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Trim43cP86449 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trim43cP86449 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim43cP86449 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim43cP86449 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trim43cP86449 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trim43cP86449 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trim43cP86449 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Gm5566-201ENSMUST00000116118 459 ntBASIC15.61■□□□□ 0.09
Trim43cP86449 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.61■□□□□ 0.09
Trim43cP86449 Gm27631-201ENSMUST00000184163 466 ntBASIC15.61■□□□□ 0.09
Trim43cP86449 Gm2213-201ENSMUST00000197485 688 ntBASIC15.61■□□□□ 0.09
Trim43cP86449 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.61■□□□□ 0.09
Trim43cP86449 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Trim43cP86449 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trim43cP86449 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trim43cP86449 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim43cP86449 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim43cP86449 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.6■□□□□ 0.09
Trim43cP86449 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.6■□□□□ 0.09
Trim43cP86449 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim43cP86449 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim43cP86449 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.6■□□□□ 0.09
Trim43cP86449 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim43cP86449 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim43cP86449 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim43cP86449 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim43cP86449 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trim43cP86449 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim43cP86449 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim43cP86449 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.6■□□□□ 0.09
Trim43cP86449 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim43cP86449 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trim43cP86449 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim43cP86449 Gm9824-201ENSMUST00000178707 561 ntBASIC15.6■□□□□ 0.09
Trim43cP86449 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim43cP86449 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.6■□□□□ 0.09
Trim43cP86449 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim43cP86449 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim43cP86449 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim43cP86449 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms