Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim43bP86448 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim43bP86448 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43bP86448 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Trim43bP86448 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.79□□□□□ -0.04
Trim43bP86448 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Trim43bP86448 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim43bP86448 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.79□□□□□ -0.04
Trim43bP86448 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.79□□□□□ -0.04
Trim43bP86448 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trim43bP86448 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim43bP86448 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.78□□□□□ -0.04
Trim43bP86448 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim43bP86448 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim43bP86448 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trim43bP86448 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.78□□□□□ -0.04
Trim43bP86448 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim43bP86448 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.78□□□□□ -0.04
Trim43bP86448 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Trim43bP86448 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim43bP86448 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Trim43bP86448 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trim43bP86448 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Trim43bP86448 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim43bP86448 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim43bP86448 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim43bP86448 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim43bP86448 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43bP86448 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43bP86448 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43bP86448 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43bP86448 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43bP86448 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.77□□□□□ -0.04
Trim43bP86448 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43bP86448 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trim43bP86448 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43bP86448 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trim43bP86448 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim43bP86448 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.77□□□□□ -0.04
Trim43bP86448 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trim43bP86448 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43bP86448 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43bP86448 Gm2272-201ENSMUST00000194903 582 ntBASIC14.77□□□□□ -0.05
Trim43bP86448 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.77□□□□□ -0.05
Trim43bP86448 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43bP86448 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Trim43bP86448 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim43bP86448 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Trim43bP86448 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Trim43bP86448 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms