Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
H3f3aP84244 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.8□□□□□ -0.36
H3f3aP84244 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H3f3aP84244 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
H3f3aP84244 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
H3f3aP84244 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
H3f3aP84244 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.79□□□□□ -0.36
H3f3aP84244 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.79□□□□□ -0.36
H3f3aP84244 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.79□□□□□ -0.36
H3f3aP84244 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.79□□□□□ -0.36
H3f3aP84244 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.79□□□□□ -0.36
H3f3aP84244 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
H3f3aP84244 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.79□□□□□ -0.36
H3f3aP84244 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.79□□□□□ -0.36
H3f3aP84244 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3f3aP84244 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.79□□□□□ -0.36
H3f3aP84244 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
H3f3aP84244 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
H3f3aP84244 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
H3f3aP84244 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.78□□□□□ -0.36
H3f3aP84244 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
H3f3aP84244 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.78□□□□□ -0.36
H3f3aP84244 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.78□□□□□ -0.36
H3f3aP84244 Gm7774-201ENSMUST00000200064 533 ntBASIC12.78□□□□□ -0.36
H3f3aP84244 Gm5779-201ENSMUST00000218467 910 ntBASIC12.78□□□□□ -0.36
H3f3aP84244 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
H3f3aP84244 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
H3f3aP84244 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.78□□□□□ -0.36
H3f3aP84244 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
H3f3aP84244 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.78□□□□□ -0.36
H3f3aP84244 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3f3aP84244 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H3f3aP84244 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
H3f3aP84244 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
H3f3aP84244 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H3f3aP84244 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
H3f3aP84244 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H3f3aP84244 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H3f3aP84244 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H3f3aP84244 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H3f3aP84244 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H3f3aP84244 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
H3f3aP84244 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.77□□□□□ -0.36
H3f3aP84244 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H3f3aP84244 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
H3f3aP84244 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
H3f3aP84244 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.77□□□□□ -0.37
H3f3aP84244 Gm5566-201ENSMUST00000116118 459 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms