Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sec61a1P61620 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Sec61a1P61620 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Sec61a1P61620 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sec61a1P61620 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sec61a1P61620 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.68□□□□□ -0.38
Sec61a1P61620 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.68□□□□□ -0.38
Sec61a1P61620 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.68□□□□□ -0.38
Sec61a1P61620 Gm2213-201ENSMUST00000197485 688 ntBASIC12.68□□□□□ -0.38
Sec61a1P61620 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.68□□□□□ -0.38
Sec61a1P61620 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.68□□□□□ -0.38
Sec61a1P61620 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.68□□□□□ -0.38
Sec61a1P61620 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sec61a1P61620 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.68□□□□□ -0.38
Sec61a1P61620 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sec61a1P61620 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.67□□□□□ -0.38
Sec61a1P61620 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sec61a1P61620 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.67□□□□□ -0.38
Sec61a1P61620 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.67□□□□□ -0.38
Sec61a1P61620 Gm13597-201ENSMUST00000121239 375 ntBASIC12.67□□□□□ -0.38
Sec61a1P61620 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.67□□□□□ -0.38
Sec61a1P61620 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.67□□□□□ -0.38
Sec61a1P61620 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.67□□□□□ -0.38
Sec61a1P61620 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sec61a1P61620 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.67□□□□□ -0.38
Sec61a1P61620 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.67□□□□□ -0.38
Sec61a1P61620 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.67□□□□□ -0.38
Sec61a1P61620 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.67□□□□□ -0.38
Sec61a1P61620 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.67□□□□□ -0.38
Sec61a1P61620 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sec61a1P61620 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Sec61a1P61620 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sec61a1P61620 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sec61a1P61620 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sec61a1P61620 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms