Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Acot6-202ENSMUST00000222921 3622 ntBASIC12.75□□□□□ -0.37
Sf3b6P59708 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Sf3b6P59708 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.75□□□□□ -0.37
Sf3b6P59708 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Sf3b6P59708 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Gm8584-201ENSMUST00000171982 758 ntBASIC12.75□□□□□ -0.37
Sf3b6P59708 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.75□□□□□ -0.37
Sf3b6P59708 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.75□□□□□ -0.37
Sf3b6P59708 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.75□□□□□ -0.37
Sf3b6P59708 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.75□□□□□ -0.37
Sf3b6P59708 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sf3b6P59708 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.75□□□□□ -0.37
Sf3b6P59708 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.75□□□□□ -0.37
Sf3b6P59708 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.75□□□□□ -0.37
Sf3b6P59708 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Gm10060-201ENSMUST00000212002 111 ntBASIC12.75□□□□□ -0.37
Sf3b6P59708 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.75□□□□□ -0.37
Sf3b6P59708 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Sf3b6P59708 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Sf3b6P59708 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Sf3b6P59708 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Sf3b6P59708 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.74□□□□□ -0.37
Sf3b6P59708 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Sf3b6P59708 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.74□□□□□ -0.37
Sf3b6P59708 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.74□□□□□ -0.37
Sf3b6P59708 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Sf3b6P59708 Gm25990-201ENSMUST00000102440 86 ntBASIC12.74□□□□□ -0.37
Sf3b6P59708 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sf3b6P59708 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sf3b6P59708 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Sf3b6P59708 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Sf3b6P59708 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sf3b6P59708 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Sf3b6P59708 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.74□□□□□ -0.37
Sf3b6P59708 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sf3b6P59708 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sf3b6P59708 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Sf3b6P59708 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Sf3b6P59708 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.73□□□□□ -0.37
Sf3b6P59708 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.73□□□□□ -0.37
Sf3b6P59708 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sf3b6P59708 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms