Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Sssca1P56873 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sssca1P56873 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sssca1P56873 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sssca1P56873 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.63□□□□□ -0.55
Sssca1P56873 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Sssca1P56873 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sssca1P56873 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sssca1P56873 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Sssca1P56873 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.62□□□□□ -0.55
Sssca1P56873 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Sssca1P56873 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.62□□□□□ -0.55
Sssca1P56873 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Sssca1P56873 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Sssca1P56873 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.62□□□□□ -0.55
Sssca1P56873 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.62□□□□□ -0.55
Sssca1P56873 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Sssca1P56873 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.62□□□□□ -0.55
Sssca1P56873 Gm14042-201ENSMUST00000120139 833 ntBASIC11.62□□□□□ -0.55
Sssca1P56873 Gm15173-201ENSMUST00000122049 433 ntBASIC11.62□□□□□ -0.55
Sssca1P56873 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.62□□□□□ -0.55
Sssca1P56873 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Sssca1P56873 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Gm6376-201ENSMUST00000209407 580 ntBASIC11.62□□□□□ -0.55
Sssca1P56873 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Sssca1P56873 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sssca1P56873 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.62□□□□□ -0.55
Sssca1P56873 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sssca1P56873 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Sssca1P56873 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.62□□□□□ -0.55
Sssca1P56873 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Sssca1P56873 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sssca1P56873 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Sssca1P56873 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sssca1P56873 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Sssca1P56873 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sssca1P56873 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.61□□□□□ -0.55
Sssca1P56873 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sssca1P56873 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.61□□□□□ -0.55
Sssca1P56873 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sssca1P56873 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sssca1P56873 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.61□□□□□ -0.55
Sssca1P56873 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sssca1P56873 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.61□□□□□ -0.55
Sssca1P56873 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.61□□□□□ -0.55
Sssca1P56873 Gm6550-201ENSMUST00000187574 993 ntBASIC11.61□□□□□ -0.55
Sssca1P56873 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.61□□□□□ -0.55
Sssca1P56873 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.61□□□□□ -0.55
Sssca1P56873 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sssca1P56873 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sssca1P56873 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms