Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.37□□□□□ -0.11
Fdft1P53798 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.37□□□□□ -0.11
Fdft1P53798 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Fdft1P53798 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fdft1P53798 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Fdft1P53798 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.36□□□□□ -0.11
Fdft1P53798 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Fdft1P53798 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Fdft1P53798 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.36□□□□□ -0.11
Fdft1P53798 Mir3113-201ENSMUST00000175478 76 ntBASIC14.36□□□□□ -0.11
Fdft1P53798 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.36□□□□□ -0.11
Fdft1P53798 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.36□□□□□ -0.11
Fdft1P53798 Gm2451-201ENSMUST00000199447 999 ntBASIC14.36□□□□□ -0.11
Fdft1P53798 Gm10290-201ENSMUST00000200451 999 ntBASIC14.36□□□□□ -0.11
Fdft1P53798 AW822252-206ENSMUST00000208904 237 ntBASIC14.36□□□□□ -0.11
Fdft1P53798 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Fdft1P53798 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.36□□□□□ -0.11
Fdft1P53798 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Fdft1P53798 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.36□□□□□ -0.11
Fdft1P53798 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fdft1P53798 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Fdft1P53798 Gm11779-201ENSMUST00000118541 368 ntBASIC14.35□□□□□ -0.11
Fdft1P53798 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.35□□□□□ -0.11
Fdft1P53798 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.35□□□□□ -0.11
Fdft1P53798 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.35□□□□□ -0.11
Fdft1P53798 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Fdft1P53798 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.35□□□□□ -0.11
Fdft1P53798 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.35□□□□□ -0.11
Fdft1P53798 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.35□□□□□ -0.11
Fdft1P53798 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fdft1P53798 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fdft1P53798 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fdft1P53798 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fdft1P53798 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fdft1P53798 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Fdft1P53798 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fdft1P53798 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fdft1P53798 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Fdft1P53798 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Fdft1P53798 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fdft1P53798 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.34□□□□□ -0.11
Fdft1P53798 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Fdft1P53798 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.34□□□□□ -0.11
Fdft1P53798 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.34□□□□□ -0.11
Fdft1P53798 Gm15467-201ENSMUST00000120582 445 ntBASIC14.34□□□□□ -0.11
Fdft1P53798 Gm17271-201ENSMUST00000165535 355 ntBASIC14.34□□□□□ -0.11
Fdft1P53798 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.34□□□□□ -0.11
Fdft1P53798 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.34□□□□□ -0.11
Fdft1P53798 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.34□□□□□ -0.11
Fdft1P53798 Gm6443-201ENSMUST00000203599 874 ntBASIC14.34□□□□□ -0.11
Fdft1P53798 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.34□□□□□ -0.11
Fdft1P53798 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.34□□□□□ -0.11
Fdft1P53798 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.34□□□□□ -0.11
Fdft1P53798 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms