Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm17794-201ENSMUST00000220252 955 ntBASIC13.59□□□□□ -0.23
Cdx2P43241 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdx2P43241 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cdx2P43241 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdx2P43241 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdx2P43241 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdx2P43241 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Cdx2P43241 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdx2P43241 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cdx2P43241 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdx2P43241 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdx2P43241 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdx2P43241 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Cdx2P43241 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cdx2P43241 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cdx2P43241 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cdx2P43241 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.58□□□□□ -0.24
Cdx2P43241 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.58□□□□□ -0.24
Cdx2P43241 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cdx2P43241 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.58□□□□□ -0.24
Cdx2P43241 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdx2P43241 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cdx2P43241 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cdx2P43241 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cdx2P43241 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.57□□□□□ -0.24
Cdx2P43241 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Gm12957-201ENSMUST00000117835 377 ntBASIC13.57□□□□□ -0.24
Cdx2P43241 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cdx2P43241 Gm45841-201ENSMUST00000207700 164 ntBASIC13.57□□□□□ -0.24
Cdx2P43241 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdx2P43241 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdx2P43241 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms