Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.98□□□□□ -0.49
Abca1P41233 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Abca1P41233 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Abca1P41233 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Abca1P41233 Mir7085-201ENSMUST00000184353 66 ntBASIC11.97□□□□□ -0.49
Abca1P41233 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.97□□□□□ -0.49
Abca1P41233 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.97□□□□□ -0.49
Abca1P41233 Gm9908-201ENSMUST00000211534 448 ntBASIC11.97□□□□□ -0.49
Abca1P41233 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.97□□□□□ -0.49
Abca1P41233 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.97□□□□□ -0.49
Abca1P41233 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Abca1P41233 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.97□□□□□ -0.49
Abca1P41233 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Abca1P41233 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.97□□□□□ -0.49
Abca1P41233 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Abca1P41233 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.96□□□□□ -0.49
Abca1P41233 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Abca1P41233 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.96□□□□□ -0.49
Abca1P41233 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.96□□□□□ -0.49
Abca1P41233 Gm11478-201ENSMUST00000117851 599 ntBASIC11.96□□□□□ -0.49
Abca1P41233 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.96□□□□□ -0.49
Abca1P41233 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.96□□□□□ -0.49
Abca1P41233 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Gm5479-201ENSMUST00000160578 435 ntBASIC11.96□□□□□ -0.49
Abca1P41233 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.96□□□□□ -0.49
Abca1P41233 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.96□□□□□ -0.49
Abca1P41233 Gm43630-201ENSMUST00000201550 776 ntBASIC11.96□□□□□ -0.49
Abca1P41233 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Abca1P41233 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Abca1P41233 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Abca1P41233 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Abca1P41233 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.96□□□□□ -0.5
Abca1P41233 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Abca1P41233 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Abca1P41233 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Abca1P41233 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Abca1P41233 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Abca1P41233 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.96□□□□□ -0.5
Abca1P41233 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Abca1P41233 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Abca1P41233 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.96□□□□□ -0.5
Abca1P41233 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Abca1P41233 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Abca1P41233 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Abca1P41233 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Abca1P41233 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Abca1P41233 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Abca1P41233 Gm24543-201ENSMUST00000103867 82 ntBASIC11.95□□□□□ -0.5
Abca1P41233 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Abca1P41233 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.95□□□□□ -0.5
Abca1P41233 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Abca1P41233 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Abca1P41233 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.95□□□□□ -0.5
Abca1P41233 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Abca1P41233 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Abca1P41233 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Abca1P41233 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Abca1P41233 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Abca1P41233 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Abca1P41233 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.95□□□□□ -0.5
Abca1P41233 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Abca1P41233 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms