Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Timp3P39876 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Timp3P39876 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.8□□□□□ -0.52
Timp3P39876 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Timp3P39876 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.8□□□□□ -0.52
Timp3P39876 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Timp3P39876 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Timp3P39876 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Gm18049-201ENSMUST00000208909 581 ntBASIC11.8□□□□□ -0.52
Timp3P39876 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.8□□□□□ -0.52
Timp3P39876 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Timp3P39876 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.8□□□□□ -0.52
Timp3P39876 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.8□□□□□ -0.52
Timp3P39876 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.8□□□□□ -0.52
Timp3P39876 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.8□□□□□ -0.52
Timp3P39876 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Timp3P39876 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Timp3P39876 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Timp3P39876 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Timp3P39876 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Timp3P39876 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Timp3P39876 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Timp3P39876 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.79□□□□□ -0.52
Timp3P39876 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 Gm27920-201ENSMUST00000183953 96 ntBASIC11.79□□□□□ -0.52
Timp3P39876 Gm20949-201ENSMUST00000206478 952 ntBASIC11.79□□□□□ -0.52
Timp3P39876 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.79□□□□□ -0.52
Timp3P39876 Gm5779-201ENSMUST00000218467 910 ntBASIC11.79□□□□□ -0.52
Timp3P39876 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.79□□□□□ -0.52
Timp3P39876 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Timp3P39876 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.79□□□□□ -0.52
Timp3P39876 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.79□□□□□ -0.52
Timp3P39876 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Timp3P39876 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.79□□□□□ -0.52
Timp3P39876 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Timp3P39876 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Timp3P39876 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.78□□□□□ -0.52
Timp3P39876 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.78□□□□□ -0.52
Timp3P39876 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.78□□□□□ -0.52
Timp3P39876 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Timp3P39876 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.78□□□□□ -0.52
Timp3P39876 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Timp3P39876 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.78□□□□□ -0.52
Timp3P39876 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Timp3P39876 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.78□□□□□ -0.52
Timp3P39876 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms