Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HmgclP38060 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HmgclP38060 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HmgclP38060 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HmgclP38060 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HmgclP38060 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.17□□□□□ -0.14
HmgclP38060 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.17□□□□□ -0.14
HmgclP38060 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.17□□□□□ -0.14
HmgclP38060 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HmgclP38060 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
HmgclP38060 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.17□□□□□ -0.14
HmgclP38060 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Gm13823-201ENSMUST00000119930 345 ntBASIC14.17□□□□□ -0.14
HmgclP38060 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.17□□□□□ -0.14
HmgclP38060 Gm5312-201ENSMUST00000203728 547 ntBASIC14.17□□□□□ -0.14
HmgclP38060 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.17□□□□□ -0.14
HmgclP38060 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.17□□□□□ -0.14
HmgclP38060 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.17□□□□□ -0.14
HmgclP38060 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HmgclP38060 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HmgclP38060 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.16□□□□□ -0.14
HmgclP38060 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.16□□□□□ -0.14
HmgclP38060 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.16□□□□□ -0.14
HmgclP38060 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HmgclP38060 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.16□□□□□ -0.14
HmgclP38060 Gm24158-201ENSMUST00000175263 71 ntBASIC14.16□□□□□ -0.14
HmgclP38060 Gm29541-201ENSMUST00000191351 678 ntBASIC14.16□□□□□ -0.14
HmgclP38060 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.16□□□□□ -0.14
HmgclP38060 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.16□□□□□ -0.14
HmgclP38060 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Gm8396-201ENSMUST00000057361 823 ntBASIC14.16□□□□□ -0.14
HmgclP38060 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
HmgclP38060 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.16□□□□□ -0.14
HmgclP38060 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
HmgclP38060 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HmgclP38060 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.15□□□□□ -0.14
HmgclP38060 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.15□□□□□ -0.14
HmgclP38060 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.15□□□□□ -0.14
HmgclP38060 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.15□□□□□ -0.14
HmgclP38060 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HmgclP38060 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.15□□□□□ -0.14
HmgclP38060 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
HmgclP38060 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Gm26308-201ENSMUST00000157768 69 ntBASIC14.15□□□□□ -0.14
HmgclP38060 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.15□□□□□ -0.14
HmgclP38060 Gm18766-201ENSMUST00000189811 808 ntBASIC14.15□□□□□ -0.14
HmgclP38060 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.15□□□□□ -0.14
HmgclP38060 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.15□□□□□ -0.14
HmgclP38060 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HmgclP38060 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms