Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.29□□□□□ -0.12
Nckap1P28660 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nckap1P28660 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nckap1P28660 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nckap1P28660 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.29□□□□□ -0.12
Nckap1P28660 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nckap1P28660 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nckap1P28660 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nckap1P28660 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nckap1P28660 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nckap1P28660 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nckap1P28660 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nckap1P28660 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nckap1P28660 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nckap1P28660 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nckap1P28660 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nckap1P28660 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.28□□□□□ -0.12
Nckap1P28660 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.28□□□□□ -0.12
Nckap1P28660 Gm28631-201ENSMUST00000190740 334 ntBASIC14.28□□□□□ -0.12
Nckap1P28660 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.28□□□□□ -0.12
Nckap1P28660 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.28□□□□□ -0.12
Nckap1P28660 Gm6218-201ENSMUST00000219812 628 ntBASIC14.28□□□□□ -0.12
Nckap1P28660 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.28□□□□□ -0.12
Nckap1P28660 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nckap1P28660 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.28□□□□□ -0.12
Nckap1P28660 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.28□□□□□ -0.12
Nckap1P28660 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nckap1P28660 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nckap1P28660 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nckap1P28660 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nckap1P28660 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nckap1P28660 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nckap1P28660 BC037039-201ENSMUST00000192003 2205 ntBASIC14.27□□□□□ -0.12
Nckap1P28660 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Nckap1P28660 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nckap1P28660 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nckap1P28660 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nckap1P28660 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.27□□□□□ -0.12
Nckap1P28660 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nckap1P28660 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nckap1P28660 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nckap1P28660 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.27□□□□□ -0.12
Nckap1P28660 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nckap1P28660 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nckap1P28660 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nckap1P28660 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nckap1P28660 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nckap1P28660 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nckap1P28660 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.27□□□□□ -0.13
Nckap1P28660 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nckap1P28660 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nckap1P28660 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nckap1P28660 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.27□□□□□ -0.13
Nckap1P28660 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nckap1P28660 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nckap1P28660 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nckap1P28660 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nckap1P28660 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nckap1P28660 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nckap1P28660 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nckap1P28660 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nckap1P28660 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nckap1P28660 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.26□□□□□ -0.13
Nckap1P28660 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nckap1P28660 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Gm12859-201ENSMUST00000117834 427 ntBASIC14.26□□□□□ -0.13
Nckap1P28660 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.26□□□□□ -0.13
Nckap1P28660 Gm10275-202ENSMUST00000168697 495 ntBASIC14.26□□□□□ -0.13
Nckap1P28660 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.26□□□□□ -0.13
Nckap1P28660 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nckap1P28660 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nckap1P28660 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nckap1P28660 Gm10275-201ENSMUST00000092620 635 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms