Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.22□□□□□ -0.61
Ccl6P27784 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.22□□□□□ -0.61
Ccl6P27784 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.22□□□□□ -0.61
Ccl6P27784 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccl6P27784 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccl6P27784 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
Ccl6P27784 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.22□□□□□ -0.61
Ccl6P27784 Gm43514-201ENSMUST00000198852 424 ntBASIC11.22□□□□□ -0.61
Ccl6P27784 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ccl6P27784 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ccl6P27784 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ccl6P27784 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccl6P27784 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ccl6P27784 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.21□□□□□ -0.61
Ccl6P27784 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.21□□□□□ -0.61
Ccl6P27784 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Ccl6P27784 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Gm15427-201ENSMUST00000117288 531 ntBASIC11.21□□□□□ -0.61
Ccl6P27784 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Gm8749-201ENSMUST00000117737 331 ntBASIC11.21□□□□□ -0.61
Ccl6P27784 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.21□□□□□ -0.61
Ccl6P27784 Gm23547-201ENSMUST00000158210 271 ntBASIC11.21□□□□□ -0.61
Ccl6P27784 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.21□□□□□ -0.61
Ccl6P27784 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.21□□□□□ -0.61
Ccl6P27784 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.21□□□□□ -0.61
Ccl6P27784 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.21□□□□□ -0.61
Ccl6P27784 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.21□□□□□ -0.61
Ccl6P27784 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ccl6P27784 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl6P27784 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl6P27784 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Ccl6P27784 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.21□□□□□ -0.62
Ccl6P27784 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl6P27784 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl6P27784 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl6P27784 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Ccl6P27784 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl6P27784 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.21□□□□□ -0.62
Ccl6P27784 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl6P27784 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl6P27784 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl6P27784 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl6P27784 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl6P27784 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
Ccl6P27784 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.21□□□□□ -0.62
Ccl6P27784 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ccl6P27784 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Ccl6P27784 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Ccl6P27784 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.2□□□□□ -0.62
Ccl6P27784 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.2□□□□□ -0.62
Ccl6P27784 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccl6P27784 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.2□□□□□ -0.62
Ccl6P27784 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Ccl6P27784 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Gm4995-201ENSMUST00000117247 432 ntBASIC11.2□□□□□ -0.62
Ccl6P27784 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ccl6P27784 Rpph1-201ENSMUST00000175096 319 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms