Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Rpl3P27659 Gm17271-201ENSMUST00000165535 355 ntBASIC13.63□□□□□ -0.23
Rpl3P27659 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.63□□□□□ -0.23
Rpl3P27659 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.63□□□□□ -0.23
Rpl3P27659 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl3P27659 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl3P27659 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl3P27659 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl3P27659 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl3P27659 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl3P27659 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl3P27659 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rpl3P27659 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rpl3P27659 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl3P27659 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl3P27659 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.63□□□□□ -0.23
Rpl3P27659 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl3P27659 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl3P27659 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl3P27659 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Rpl3P27659 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpl3P27659 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpl3P27659 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpl3P27659 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpl3P27659 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Rpl3P27659 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.62□□□□□ -0.23
Rpl3P27659 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.62□□□□□ -0.23
Rpl3P27659 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.62□□□□□ -0.23
Rpl3P27659 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rpl3P27659 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.62□□□□□ -0.23
Rpl3P27659 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpl3P27659 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rpl3P27659 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpl3P27659 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpl3P27659 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rpl3P27659 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl3P27659 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rpl3P27659 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Rpl3P27659 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rpl3P27659 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rpl3P27659 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpl3P27659 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Rpl3P27659 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.61□□□□□ -0.23
Rpl3P27659 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rpl3P27659 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.61□□□□□ -0.23
Rpl3P27659 Mir3113-201ENSMUST00000175478 76 ntBASIC13.61□□□□□ -0.23
Rpl3P27659 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpl3P27659 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl3P27659 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl3P27659 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl3P27659 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rpl3P27659 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl3P27659 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl3P27659 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl3P27659 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl3P27659 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl3P27659 Gm6973-201ENSMUST00000117080 721 ntBASIC13.6□□□□□ -0.23
Rpl3P27659 Gm12260-201ENSMUST00000122447 411 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms