Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd40lgP27548 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Cd40lgP27548 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd40lgP27548 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd40lgP27548 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cd40lgP27548 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd40lgP27548 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd40lgP27548 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd40lgP27548 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cd40lgP27548 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cd40lgP27548 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.27□□□□□ -0.28
Cd40lgP27548 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.27□□□□□ -0.28
Cd40lgP27548 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Cd40lgP27548 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.27□□□□□ -0.29
Cd40lgP27548 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.27□□□□□ -0.29
Cd40lgP27548 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cd40lgP27548 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.27□□□□□ -0.29
Cd40lgP27548 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.27□□□□□ -0.29
Cd40lgP27548 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.27□□□□□ -0.29
Cd40lgP27548 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.27□□□□□ -0.29
Cd40lgP27548 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.27□□□□□ -0.29
Cd40lgP27548 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.27□□□□□ -0.29
Cd40lgP27548 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.27□□□□□ -0.29
Cd40lgP27548 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.27□□□□□ -0.29
Cd40lgP27548 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cd40lgP27548 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Cd40lgP27548 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.27□□□□□ -0.29
Cd40lgP27548 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cd40lgP27548 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cd40lgP27548 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cd40lgP27548 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Cd40lgP27548 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.26□□□□□ -0.29
Cd40lgP27548 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Cd40lgP27548 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cd40lgP27548 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Gm6973-201ENSMUST00000117080 721 ntBASIC13.26□□□□□ -0.29
Cd40lgP27548 Gm13365-201ENSMUST00000121188 973 ntBASIC13.26□□□□□ -0.29
Cd40lgP27548 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.26□□□□□ -0.29
Cd40lgP27548 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.26□□□□□ -0.29
Cd40lgP27548 Gm18889-201ENSMUST00000174284 929 ntBASIC13.26□□□□□ -0.29
Cd40lgP27548 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Cd40lgP27548 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cd40lgP27548 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Gm44335-201ENSMUST00000196879 141 ntBASIC13.26□□□□□ -0.29
Cd40lgP27548 Gm44297-201ENSMUST00000198304 141 ntBASIC13.26□□□□□ -0.29
Cd40lgP27548 Gm44346-201ENSMUST00000198851 141 ntBASIC13.26□□□□□ -0.29
Cd40lgP27548 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.26□□□□□ -0.29
Cd40lgP27548 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cd40lgP27548 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.26□□□□□ -0.29
Cd40lgP27548 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cd40lgP27548 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.26□□□□□ -0.29
Cd40lgP27548 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.26□□□□□ -0.29
Cd40lgP27548 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cd40lgP27548 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cd40lgP27548 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cd40lgP27548 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cd40lgP27548 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.25□□□□□ -0.29
Cd40lgP27548 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cd40lgP27548 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cd40lgP27548 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms