Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pde6bP23440 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pde6bP23440 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Pde6bP23440 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.69■□□□□ 0.1
Pde6bP23440 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.69■□□□□ 0.1
Pde6bP23440 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.69■□□□□ 0.1
Pde6bP23440 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.69■□□□□ 0.1
Pde6bP23440 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Pde6bP23440 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Gm24694-201ENSMUST00000180054 110 ntBASIC15.69■□□□□ 0.1
Pde6bP23440 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.69■□□□□ 0.1
Pde6bP23440 Gm27663-201ENSMUST00000184839 110 ntBASIC15.69■□□□□ 0.1
Pde6bP23440 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.69■□□□□ 0.1
Pde6bP23440 Gm2451-201ENSMUST00000199447 999 ntBASIC15.69■□□□□ 0.1
Pde6bP23440 Gm10290-201ENSMUST00000200451 999 ntBASIC15.69■□□□□ 0.1
Pde6bP23440 Gm46209-201ENSMUST00000217912 553 ntBASIC15.69■□□□□ 0.1
Pde6bP23440 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pde6bP23440 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pde6bP23440 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pde6bP23440 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.68■□□□□ 0.1
Pde6bP23440 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.68■□□□□ 0.1
Pde6bP23440 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Pde6bP23440 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.68■□□□□ 0.1
Pde6bP23440 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Pde6bP23440 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Pde6bP23440 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.68■□□□□ 0.1
Pde6bP23440 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pde6bP23440 Gm9182-201ENSMUST00000217829 639 ntBASIC15.68■□□□□ 0.1
Pde6bP23440 Gm16476-201ENSMUST00000221544 139 ntBASIC15.68■□□□□ 0.1
Pde6bP23440 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.68■□□□□ 0.1
Pde6bP23440 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pde6bP23440 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.67■□□□□ 0.1
Pde6bP23440 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.67■□□□□ 0.1
Pde6bP23440 Gm15321-201ENSMUST00000121290 288 ntBASIC15.67■□□□□ 0.1
Pde6bP23440 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.67■□□□□ 0.1
Pde6bP23440 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.67■□□□□ 0.1
Pde6bP23440 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.67■□□□□ 0.1
Pde6bP23440 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.67■□□□□ 0.1
Pde6bP23440 Dupd1-202ENSMUST00000224735 548 ntBASIC15.67■□□□□ 0.1
Pde6bP23440 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pde6bP23440 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.67■□□□□ 0.1
Pde6bP23440 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms