Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hmgn1P18608 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.15□□□□□ -0.3
Hmgn1P18608 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.15□□□□□ -0.3
Hmgn1P18608 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.15□□□□□ -0.3
Hmgn1P18608 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hmgn1P18608 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hmgn1P18608 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hmgn1P18608 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.15□□□□□ -0.3
Hmgn1P18608 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Mir7071-201ENSMUST00000184847 69 ntBASIC13.15□□□□□ -0.3
Hmgn1P18608 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmgn1P18608 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.15□□□□□ -0.3
Hmgn1P18608 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmgn1P18608 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.15□□□□□ -0.3
Hmgn1P18608 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.15□□□□□ -0.3
Hmgn1P18608 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hmgn1P18608 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Hmgn1P18608 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hmgn1P18608 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hmgn1P18608 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hmgn1P18608 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hmgn1P18608 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hmgn1P18608 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hmgn1P18608 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hmgn1P18608 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.14□□□□□ -0.31
Hmgn1P18608 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.14□□□□□ -0.31
Hmgn1P18608 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.14□□□□□ -0.31
Hmgn1P18608 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.14□□□□□ -0.31
Hmgn1P18608 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmgn1P18608 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmgn1P18608 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmgn1P18608 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.14□□□□□ -0.31
Hmgn1P18608 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.14□□□□□ -0.31
Hmgn1P18608 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmgn1P18608 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hmgn1P18608 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmgn1P18608 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Hmgn1P18608 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
Hmgn1P18608 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.14□□□□□ -0.31
Hmgn1P18608 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.14□□□□□ -0.31
Hmgn1P18608 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hmgn1P18608 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgn1P18608 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgn1P18608 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgn1P18608 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.13□□□□□ -0.31
Hmgn1P18608 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgn1P18608 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgn1P18608 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgn1P18608 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgn1P18608 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgn1P18608 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Hmgn1P18608 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgn1P18608 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgn1P18608 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgn1P18608 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgn1P18608 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hmgn1P18608 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hmgn1P18608 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hmgn1P18608 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.13□□□□□ -0.31
Hmgn1P18608 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Hmgn1P18608 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms