Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Cntn1P12960 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cntn1P12960 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cntn1P12960 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cntn1P12960 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Cntn1P12960 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cntn1P12960 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cntn1P12960 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cntn1P12960 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.79□□□□□ -0.2
Cntn1P12960 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.79□□□□□ -0.2
Cntn1P12960 Mir1897-201ENSMUST00000122581 272 ntBASIC13.79□□□□□ -0.2
Cntn1P12960 Gm27631-201ENSMUST00000184163 466 ntBASIC13.79□□□□□ -0.2
Cntn1P12960 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.79□□□□□ -0.2
Cntn1P12960 Gm44344-201ENSMUST00000200287 129 ntBASIC13.79□□□□□ -0.2
Cntn1P12960 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.79□□□□□ -0.2
Cntn1P12960 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cntn1P12960 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cntn1P12960 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cntn1P12960 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Cntn1P12960 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cntn1P12960 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cntn1P12960 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.79□□□□□ -0.2
Cntn1P12960 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.79□□□□□ -0.2
Cntn1P12960 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cntn1P12960 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cntn1P12960 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Cntn1P12960 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cntn1P12960 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Cntn1P12960 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.78□□□□□ -0.2
Cntn1P12960 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cntn1P12960 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cntn1P12960 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.78□□□□□ -0.2
Cntn1P12960 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.78□□□□□ -0.2
Cntn1P12960 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.78□□□□□ -0.2
Cntn1P12960 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.78□□□□□ -0.2
Cntn1P12960 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.78□□□□□ -0.2
Cntn1P12960 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cntn1P12960 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cntn1P12960 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cntn1P12960 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cntn1P12960 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.77□□□□□ -0.2
Cntn1P12960 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cntn1P12960 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.77□□□□□ -0.21
Cntn1P12960 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cntn1P12960 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cntn1P12960 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.77□□□□□ -0.21
Cntn1P12960 Gm27321-201ENSMUST00000185021 205 ntBASIC13.77□□□□□ -0.21
Cntn1P12960 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cntn1P12960 Gm9063-201ENSMUST00000223299 582 ntBASIC13.77□□□□□ -0.21
Cntn1P12960 Dupd1-202ENSMUST00000224735 548 ntBASIC13.77□□□□□ -0.21
Cntn1P12960 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cntn1P12960 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cntn1P12960 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cntn1P12960 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cntn1P12960 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cntn1P12960 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cntn1P12960 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cntn1P12960 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cntn1P12960 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cntn1P12960 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cntn1P12960 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.77□□□□□ -0.21
Cntn1P12960 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms