Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.91□□□□□ -0.5
Cxcl1P12850 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.91□□□□□ -0.5
Cxcl1P12850 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.91□□□□□ -0.5
Cxcl1P12850 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.9□□□□□ -0.5
Cxcl1P12850 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cxcl1P12850 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Cxcl1P12850 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Gm16026-204ENSMUST00000162652 683 ntBASIC11.9□□□□□ -0.5
Cxcl1P12850 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.9□□□□□ -0.5
Cxcl1P12850 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cxcl1P12850 Gm28033-201ENSMUST00000184224 96 ntBASIC11.9□□□□□ -0.5
Cxcl1P12850 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.9□□□□□ -0.5
Cxcl1P12850 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.9□□□□□ -0.5
Cxcl1P12850 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.9□□□□□ -0.5
Cxcl1P12850 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.9□□□□□ -0.5
Cxcl1P12850 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cxcl1P12850 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Cxcl1P12850 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.9□□□□□ -0.5
Cxcl1P12850 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl1P12850 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cxcl1P12850 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.9□□□□□ -0.51
Cxcl1P12850 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cxcl1P12850 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cxcl1P12850 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cxcl1P12850 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Cxcl1P12850 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cxcl1P12850 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.89□□□□□ -0.51
Cxcl1P12850 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.89□□□□□ -0.51
Cxcl1P12850 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.89□□□□□ -0.51
Cxcl1P12850 Ank2-226ENSMUST00000189368 339 ntBASIC11.89□□□□□ -0.51
Cxcl1P12850 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
Cxcl1P12850 AV026068-213ENSMUST00000223675 1171 ntBASIC11.89□□□□□ -0.51
Cxcl1P12850 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.89□□□□□ -0.51
Cxcl1P12850 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.89□□□□□ -0.51
Cxcl1P12850 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cxcl1P12850 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Cxcl1P12850 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cxcl1P12850 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.89□□□□□ -0.51
Cxcl1P12850 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.89□□□□□ -0.51
Cxcl1P12850 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl1P12850 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms