Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.51□□□□□ -0.41
UbbP0CG49 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Rps4l-201ENSMUST00000071745 943 ntBASIC12.51□□□□□ -0.41
UbbP0CG49 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.51□□□□□ -0.41
UbbP0CG49 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.51□□□□□ -0.41
UbbP0CG49 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
UbbP0CG49 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.51□□□□□ -0.41
UbbP0CG49 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
UbbP0CG49 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
UbbP0CG49 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.51□□□□□ -0.41
UbbP0CG49 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
UbbP0CG49 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
UbbP0CG49 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
UbbP0CG49 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
UbbP0CG49 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.5□□□□□ -0.41
UbbP0CG49 Gm6550-201ENSMUST00000187574 993 ntBASIC12.5□□□□□ -0.41
UbbP0CG49 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
UbbP0CG49 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
UbbP0CG49 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
UbbP0CG49 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.5□□□□□ -0.41
UbbP0CG49 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.5□□□□□ -0.41
UbbP0CG49 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.5□□□□□ -0.41
UbbP0CG49 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
UbbP0CG49 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
UbbP0CG49 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.49□□□□□ -0.41
UbbP0CG49 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.49□□□□□ -0.41
UbbP0CG49 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.49□□□□□ -0.41
UbbP0CG49 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
UbbP0CG49 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.49□□□□□ -0.41
UbbP0CG49 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.49□□□□□ -0.41
UbbP0CG49 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
UbbP0CG49 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.49□□□□□ -0.41
UbbP0CG49 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.49□□□□□ -0.41
UbbP0CG49 Gm45167-201ENSMUST00000208007 322 ntBASIC12.49□□□□□ -0.41
UbbP0CG49 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Gm6376-201ENSMUST00000209407 580 ntBASIC12.49□□□□□ -0.41
UbbP0CG49 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
UbbP0CG49 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
UbbP0CG49 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
UbbP0CG49 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.49□□□□□ -0.41
UbbP0CG49 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
UbbP0CG49 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.49□□□□□ -0.41
UbbP0CG49 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
UbbP0CG49 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UbbP0CG49 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UbbP0CG49 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UbbP0CG49 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms