Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Gm27321-201ENSMUST00000185021 205 ntBASIC12.06□□□□□ -0.48
Hoxa3P02831 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hoxa3P02831 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.06□□□□□ -0.48
Hoxa3P02831 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.06□□□□□ -0.48
Hoxa3P02831 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.06□□□□□ -0.48
Hoxa3P02831 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.06□□□□□ -0.48
Hoxa3P02831 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.06□□□□□ -0.48
Hoxa3P02831 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hoxa3P02831 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Hoxa3P02831 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Hoxa3P02831 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hoxa3P02831 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.05□□□□□ -0.48
Hoxa3P02831 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.05□□□□□ -0.48
Hoxa3P02831 Gm13464-201ENSMUST00000119418 935 ntBASIC12.05□□□□□ -0.48
Hoxa3P02831 Gm12151-201ENSMUST00000121374 290 ntBASIC12.05□□□□□ -0.48
Hoxa3P02831 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.05□□□□□ -0.48
Hoxa3P02831 Gm27306-201ENSMUST00000183970 107 ntBASIC12.05□□□□□ -0.48
Hoxa3P02831 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.05□□□□□ -0.48
Hoxa3P02831 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hoxa3P02831 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.05□□□□□ -0.48
Hoxa3P02831 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Hoxa3P02831 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
Hoxa3P02831 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa3P02831 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.04□□□□□ -0.48
Hoxa3P02831 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Hoxa3P02831 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.04□□□□□ -0.48
Hoxa3P02831 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.04□□□□□ -0.48
Hoxa3P02831 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hoxa3P02831 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms