Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.36■□□□□ 0.37
Col4a1P02463 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.36■□□□□ 0.37
Col4a1P02463 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.36■□□□□ 0.37
Col4a1P02463 Gm27731-201ENSMUST00000185192 107 ntBASIC17.36■□□□□ 0.37
Col4a1P02463 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.36■□□□□ 0.37
Col4a1P02463 Gm42693-201ENSMUST00000196779 631 ntBASIC17.36■□□□□ 0.37
Col4a1P02463 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.36■□□□□ 0.37
Col4a1P02463 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Col4a1P02463 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.36■□□□□ 0.37
Col4a1P02463 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Col4a1P02463 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.35■□□□□ 0.37
Col4a1P02463 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Gm8810-201ENSMUST00000172895 754 ntBASIC17.35■□□□□ 0.37
Col4a1P02463 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Gm29741-201ENSMUST00000192667 421 ntBASIC17.35■□□□□ 0.37
Col4a1P02463 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a1P02463 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.35■□□□□ 0.37
Col4a1P02463 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a1P02463 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.34■□□□□ 0.37
Col4a1P02463 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.34■□□□□ 0.37
Col4a1P02463 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.34■□□□□ 0.37
Col4a1P02463 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a1P02463 Gm24644-201ENSMUST00000157114 139 ntBASIC17.34■□□□□ 0.37
Col4a1P02463 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.34■□□□□ 0.37
Col4a1P02463 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC17.34■□□□□ 0.37
Col4a1P02463 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a1P02463 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a1P02463 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a1P02463 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col4a1P02463 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a1P02463 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a1P02463 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a1P02463 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a1P02463 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a1P02463 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a1P02463 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a1P02463 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Col4a1P02463 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Col4a1P02463 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a1P02463 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a1P02463 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Col4a1P02463 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.33■□□□□ 0.37
Col4a1P02463 Gm12742-201ENSMUST00000117326 410 ntBASIC17.33■□□□□ 0.37
Col4a1P02463 Gm24420-201ENSMUST00000176676 59 ntBASIC17.33■□□□□ 0.37
Col4a1P02463 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.33■□□□□ 0.37
Col4a1P02463 Gm17794-201ENSMUST00000220252 955 ntBASIC17.33■□□□□ 0.37
Col4a1P02463 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a1P02463 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a1P02463 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a1P02463 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a1P02463 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Col4a1P02463 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Col4a1P02463 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a1P02463 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a1P02463 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a1P02463 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a1P02463 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Col4a1P02463 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.33■□□□□ 0.36
Col4a1P02463 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a1P02463 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a1P02463 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a1P02463 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Col4a1P02463 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a1P02463 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a1P02463 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a1P02463 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a1P02463 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.32■□□□□ 0.36
Col4a1P02463 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC17.32■□□□□ 0.36
Col4a1P02463 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.32■□□□□ 0.36
Col4a1P02463 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a1P02463 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a1P02463 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Col4a1P02463 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a1P02463 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Col4a1P02463 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col4a1P02463 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a1P02463 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a1P02463 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.32■□□□□ 0.36
Col4a1P02463 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.32■□□□□ 0.36
Col4a1P02463 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.32■□□□□ 0.36
Col4a1P02463 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms