Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.85□□□□□ -0.67
P01739 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
P01739 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.85□□□□□ -0.67
P01739 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.85□□□□□ -0.67
P01739 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.85□□□□□ -0.67
P01739 AC154572.2-201ENSMUST00000225105 997 ntBASIC10.85□□□□□ -0.67
P01739 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.85□□□□□ -0.67
P01739 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
P01739 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.85□□□□□ -0.67
P01739 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
P01739 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
P01739 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
P01739 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
P01739 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC10.84□□□□□ -0.67
P01739 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
P01739 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
P01739 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
P01739 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.84□□□□□ -0.67
P01739 Gm9385-201ENSMUST00000117563 472 ntBASIC10.84□□□□□ -0.67
P01739 Gm1401-201ENSMUST00000122048 772 ntBASIC10.84□□□□□ -0.67
P01739 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC10.84□□□□□ -0.67
P01739 Gm45098-201ENSMUST00000207179 657 ntBASIC10.84□□□□□ -0.67
P01739 Gm45747-201ENSMUST00000212203 999 ntBASIC10.84□□□□□ -0.67
P01739 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.84□□□□□ -0.67
P01739 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
P01739 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
P01739 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
P01739 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.84□□□□□ -0.67
P01739 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01739 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.83□□□□□ -0.68
P01739 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
P01739 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01739 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
P01739 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
P01739 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01739 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01739 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01739 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01739 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01739 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01739 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01739 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC10.83□□□□□ -0.68
P01739 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.83□□□□□ -0.68
P01739 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01739 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
P01739 Gm17968-201ENSMUST00000194902 784 ntBASIC10.83□□□□□ -0.68
P01739 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01739 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.83□□□□□ -0.68
P01739 Gm5364-201ENSMUST00000216789 889 ntBASIC10.83□□□□□ -0.68
P01739 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.83□□□□□ -0.68
P01739 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.83□□□□□ -0.68
P01739 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.83□□□□□ -0.68
P01739 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
P01739 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01739 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms