Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.01□□□□□ -0.33
DhfrP00375 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.01□□□□□ -0.33
DhfrP00375 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
DhfrP00375 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DhfrP00375 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
DhfrP00375 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
DhfrP00375 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DhfrP00375 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DhfrP00375 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.01□□□□□ -0.33
DhfrP00375 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
DhfrP00375 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DhfrP00375 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DhfrP00375 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
DhfrP00375 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DhfrP00375 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.01□□□□□ -0.33
DhfrP00375 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.01□□□□□ -0.33
DhfrP00375 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
DhfrP00375 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.01□□□□□ -0.33
DhfrP00375 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
DhfrP00375 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DhfrP00375 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DhfrP00375 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
DhfrP00375 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
DhfrP00375 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13□□□□□ -0.33
DhfrP00375 Gm37644-201ENSMUST00000192190 2270 ntBASIC13□□□□□ -0.33
DhfrP00375 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
DhfrP00375 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13□□□□□ -0.33
DhfrP00375 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13□□□□□ -0.33
DhfrP00375 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13□□□□□ -0.33
DhfrP00375 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13□□□□□ -0.33
DhfrP00375 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13□□□□□ -0.33
DhfrP00375 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 AC160980.1-201ENSMUST00000224136 970 ntBASIC13□□□□□ -0.33
DhfrP00375 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13□□□□□ -0.33
DhfrP00375 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13□□□□□ -0.33
DhfrP00375 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
DhfrP00375 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
DhfrP00375 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
DhfrP00375 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.99□□□□□ -0.33
DhfrP00375 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.99□□□□□ -0.33
DhfrP00375 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.99□□□□□ -0.33
DhfrP00375 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.99□□□□□ -0.33
DhfrP00375 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.99□□□□□ -0.33
DhfrP00375 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.99□□□□□ -0.33
DhfrP00375 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
DhfrP00375 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
DhfrP00375 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
DhfrP00375 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
DhfrP00375 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.99□□□□□ -0.33
DhfrP00375 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
DhfrP00375 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
DhfrP00375 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.99□□□□□ -0.33
DhfrP00375 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
DhfrP00375 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DhfrP00375 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DhfrP00375 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
DhfrP00375 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.98□□□□□ -0.33
DhfrP00375 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DhfrP00375 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.98□□□□□ -0.33
DhfrP00375 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
DhfrP00375 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
DhfrP00375 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DhfrP00375 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DhfrP00375 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
DhfrP00375 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms