Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.07□□□□□ -0.16
ClppO88696 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
ClppO88696 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ClppO88696 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.07□□□□□ -0.16
ClppO88696 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ClppO88696 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ClppO88696 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.06□□□□□ -0.16
ClppO88696 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.06□□□□□ -0.16
ClppO88696 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ClppO88696 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
ClppO88696 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ClppO88696 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.06□□□□□ -0.16
ClppO88696 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ClppO88696 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.06□□□□□ -0.16
ClppO88696 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
ClppO88696 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.06□□□□□ -0.16
ClppO88696 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ClppO88696 Gm25144-201ENSMUST00000179561 110 ntBASIC14.06□□□□□ -0.16
ClppO88696 Gm25352-201ENSMUST00000179815 110 ntBASIC14.06□□□□□ -0.16
ClppO88696 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.06□□□□□ -0.16
ClppO88696 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.06□□□□□ -0.16
ClppO88696 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
ClppO88696 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ClppO88696 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.06□□□□□ -0.16
ClppO88696 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ClppO88696 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.06□□□□□ -0.16
ClppO88696 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ClppO88696 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ClppO88696 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.05□□□□□ -0.16
ClppO88696 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.05□□□□□ -0.16
ClppO88696 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ClppO88696 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ClppO88696 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.05□□□□□ -0.16
ClppO88696 Gm27622-201ENSMUST00000183779 60 ntBASIC14.05□□□□□ -0.16
ClppO88696 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.05□□□□□ -0.16
ClppO88696 Gm5779-201ENSMUST00000218467 910 ntBASIC14.05□□□□□ -0.16
ClppO88696 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
ClppO88696 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.05□□□□□ -0.16
ClppO88696 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
ClppO88696 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.05□□□□□ -0.16
ClppO88696 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ClppO88696 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClppO88696 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.04□□□□□ -0.16
ClppO88696 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.04□□□□□ -0.16
ClppO88696 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ClppO88696 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
ClppO88696 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.04□□□□□ -0.16
ClppO88696 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ClppO88696 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ClppO88696 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.04□□□□□ -0.16
ClppO88696 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ClppO88696 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClppO88696 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms