Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.48■□□□□ 0.39
Cops6O88545 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.48■□□□□ 0.39
Cops6O88545 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Cops6O88545 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cops6O88545 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.48■□□□□ 0.39
Cops6O88545 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cops6O88545 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.47■□□□□ 0.39
Cops6O88545 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Cops6O88545 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Cops6O88545 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.47■□□□□ 0.39
Cops6O88545 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Gm5279-201ENSMUST00000199575 745 ntBASIC17.47■□□□□ 0.39
Cops6O88545 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Gm17795-201ENSMUST00000214505 757 ntBASIC17.47■□□□□ 0.39
Cops6O88545 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.47■□□□□ 0.39
Cops6O88545 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cops6O88545 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cops6O88545 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops6O88545 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cops6O88545 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cops6O88545 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cops6O88545 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cops6O88545 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.46■□□□□ 0.39
Cops6O88545 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cops6O88545 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Cops6O88545 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cops6O88545 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Cops6O88545 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cops6O88545 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
Cops6O88545 Gm12341-201ENSMUST00000119724 503 ntBASIC17.46■□□□□ 0.39
Cops6O88545 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cops6O88545 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.46■□□□□ 0.39
Cops6O88545 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cops6O88545 Gm43433-201ENSMUST00000196573 481 ntBASIC17.46■□□□□ 0.39
Cops6O88545 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cops6O88545 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Cops6O88545 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cops6O88545 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cops6O88545 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cops6O88545 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cops6O88545 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.46■□□□□ 0.39
Cops6O88545 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.46■□□□□ 0.39
Cops6O88545 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cops6O88545 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cops6O88545 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cops6O88545 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cops6O88545 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.45■□□□□ 0.38
Cops6O88545 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops6O88545 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops6O88545 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cops6O88545 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops6O88545 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops6O88545 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.45■□□□□ 0.38
Cops6O88545 Gm37714-201ENSMUST00000194742 342 ntBASIC17.45■□□□□ 0.38
Cops6O88545 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.45■□□□□ 0.38
Cops6O88545 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.45■□□□□ 0.38
Cops6O88545 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops6O88545 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cops6O88545 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops6O88545 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cops6O88545 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cops6O88545 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.45■□□□□ 0.38
Cops6O88545 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops6O88545 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cops6O88545 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops6O88545 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cops6O88545 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops6O88545 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops6O88545 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms