Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Dnmt3aO88508 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Dnmt3aO88508 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Dnmt3aO88508 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
Dnmt3aO88508 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Dnmt3aO88508 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Dnmt3aO88508 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Dnmt3aO88508 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Dnmt3aO88508 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Dnmt3aO88508 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Dnmt3aO88508 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.47□□□□□ -0.09
Dnmt3aO88508 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.47□□□□□ -0.09
Dnmt3aO88508 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Gm25287-201ENSMUST00000103846 110 ntBASIC14.47□□□□□ -0.09
Dnmt3aO88508 Gm22918-201ENSMUST00000103855 110 ntBASIC14.47□□□□□ -0.09
Dnmt3aO88508 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Gm5312-201ENSMUST00000203728 547 ntBASIC14.47□□□□□ -0.09
Dnmt3aO88508 Gm9182-201ENSMUST00000217829 639 ntBASIC14.47□□□□□ -0.09
Dnmt3aO88508 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Dnmt3aO88508 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.47□□□□□ -0.09
Dnmt3aO88508 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Carlr-201ENSMUST00000181515 2574 ntBASIC14.47□□□□□ -0.09
Dnmt3aO88508 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.47□□□□□ -0.09
Dnmt3aO88508 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Dnmt3aO88508 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Dnmt3aO88508 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Dnmt3aO88508 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.46□□□□□ -0.1
Dnmt3aO88508 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Dnmt3aO88508 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Dnmt3aO88508 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Dnmt3aO88508 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Dnmt3aO88508 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Dnmt3aO88508 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms