Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.13□□□□□ -0.31
Alx3O70137 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.13□□□□□ -0.31
Alx3O70137 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Alx3O70137 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Alx3O70137 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.12□□□□□ -0.31
Alx3O70137 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Alx3O70137 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.12□□□□□ -0.31
Alx3O70137 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.12□□□□□ -0.31
Alx3O70137 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.12□□□□□ -0.31
Alx3O70137 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.12□□□□□ -0.31
Alx3O70137 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Alx3O70137 Gm13464-201ENSMUST00000119418 935 ntBASIC13.12□□□□□ -0.31
Alx3O70137 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.12□□□□□ -0.31
Alx3O70137 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.12□□□□□ -0.31
Alx3O70137 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.12□□□□□ -0.31
Alx3O70137 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.12□□□□□ -0.31
Alx3O70137 Gm27628-201ENSMUST00000184911 107 ntBASIC13.12□□□□□ -0.31
Alx3O70137 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Alx3O70137 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.12□□□□□ -0.31
Alx3O70137 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Alx3O70137 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Alx3O70137 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.12□□□□□ -0.31
Alx3O70137 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.12□□□□□ -0.31
Alx3O70137 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Alx3O70137 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Alx3O70137 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.11□□□□□ -0.31
Alx3O70137 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Alx3O70137 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Gm12350-201ENSMUST00000121208 462 ntBASIC13.11□□□□□ -0.31
Alx3O70137 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.11□□□□□ -0.31
Alx3O70137 Gm16026-204ENSMUST00000162652 683 ntBASIC13.11□□□□□ -0.31
Alx3O70137 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.11□□□□□ -0.31
Alx3O70137 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Alx3O70137 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Alx3O70137 Gm9726-201ENSMUST00000180321 678 ntBASIC13.11□□□□□ -0.31
Alx3O70137 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Alx3O70137 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.11□□□□□ -0.31
Alx3O70137 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.11□□□□□ -0.31
Alx3O70137 AC124408.1-201ENSMUST00000228938 707 ntBASIC13.11□□□□□ -0.31
Alx3O70137 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Alx3O70137 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Alx3O70137 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.11□□□□□ -0.31
Alx3O70137 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Alx3O70137 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.11□□□□□ -0.31
Alx3O70137 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.11□□□□□ -0.31
Alx3O70137 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Alx3O70137 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.1□□□□□ -0.31
Alx3O70137 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Alx3O70137 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms