Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.75■□□□□ 0.11
Trdmt1O55055 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trdmt1O55055 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.75■□□□□ 0.11
Trdmt1O55055 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trdmt1O55055 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.74■□□□□ 0.11
Trdmt1O55055 Gm4984-201ENSMUST00000115987 360 ntBASIC15.74■□□□□ 0.11
Trdmt1O55055 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.74■□□□□ 0.11
Trdmt1O55055 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.74■□□□□ 0.11
Trdmt1O55055 Gm18027-201ENSMUST00000218947 619 ntBASIC15.74■□□□□ 0.11
Trdmt1O55055 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.74■□□□□ 0.11
Trdmt1O55055 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.74■□□□□ 0.11
Trdmt1O55055 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Trdmt1O55055 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trdmt1O55055 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trdmt1O55055 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trdmt1O55055 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Trdmt1O55055 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.73■□□□□ 0.11
Trdmt1O55055 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Gm6244-201ENSMUST00000178732 841 ntBASIC15.73■□□□□ 0.11
Trdmt1O55055 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.73■□□□□ 0.11
Trdmt1O55055 AY702102-202ENSMUST00000194651 1173 ntBASIC15.73■□□□□ 0.11
Trdmt1O55055 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.73■□□□□ 0.11
Trdmt1O55055 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Trdmt1O55055 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trdmt1O55055 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Carlr-201ENSMUST00000181515 2574 ntBASIC15.73■□□□□ 0.11
Trdmt1O55055 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trdmt1O55055 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trdmt1O55055 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.73■□□□□ 0.11
Trdmt1O55055 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trdmt1O55055 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trdmt1O55055 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trdmt1O55055 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.72■□□□□ 0.11
Trdmt1O55055 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.72■□□□□ 0.11
Trdmt1O55055 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.72■□□□□ 0.11
Trdmt1O55055 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trdmt1O55055 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trdmt1O55055 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.72■□□□□ 0.11
Trdmt1O55055 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.72■□□□□ 0.11
Trdmt1O55055 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.72■□□□□ 0.11
Trdmt1O55055 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.72■□□□□ 0.11
Trdmt1O55055 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 Gm43630-201ENSMUST00000201550 776 ntBASIC15.72■□□□□ 0.11
Trdmt1O55055 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.72■□□□□ 0.11
Trdmt1O55055 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.72■□□□□ 0.11
Trdmt1O55055 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trdmt1O55055 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trdmt1O55055 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 Sybu-209ENSMUST00000228639 4113 ntBASIC15.72■□□□□ 0.11
Trdmt1O55055 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trdmt1O55055 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms