Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.36□□□□□ -0.59
Efnb3O35393 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.36□□□□□ -0.59
Efnb3O35393 Gm14042-201ENSMUST00000120139 833 ntBASIC11.36□□□□□ -0.59
Efnb3O35393 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.36□□□□□ -0.59
Efnb3O35393 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Gm18195-201ENSMUST00000207604 706 ntBASIC11.36□□□□□ -0.59
Efnb3O35393 Gm6376-201ENSMUST00000209407 580 ntBASIC11.36□□□□□ -0.59
Efnb3O35393 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.36□□□□□ -0.59
Efnb3O35393 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.36□□□□□ -0.59
Efnb3O35393 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.36□□□□□ -0.59
Efnb3O35393 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Efnb3O35393 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.36□□□□□ -0.59
Efnb3O35393 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Efnb3O35393 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Efnb3O35393 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Efnb3O35393 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Efnb3O35393 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Efnb3O35393 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Efnb3O35393 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Efnb3O35393 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Efnb3O35393 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Efnb3O35393 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Efnb3O35393 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.35□□□□□ -0.59
Efnb3O35393 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.35□□□□□ -0.59
Efnb3O35393 Gm13464-201ENSMUST00000119418 935 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Efnb3O35393 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Gm44357-201ENSMUST00000195897 142 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Gm19658-201ENSMUST00000196231 138 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Gm44367-201ENSMUST00000196836 138 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Gm44350-201ENSMUST00000197197 138 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Gm44390-201ENSMUST00000197533 144 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Gm44313-201ENSMUST00000198018 138 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Gm44486-201ENSMUST00000198508 138 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Gm44314-201ENSMUST00000199263 138 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Gm44394-201ENSMUST00000199558 138 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Gm44484-201ENSMUST00000199873 138 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Gm44466-201ENSMUST00000200264 138 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Gm44359-201ENSMUST00000200671 138 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.35□□□□□ -0.59
Efnb3O35393 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.35□□□□□ -0.59
Efnb3O35393 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.35□□□□□ -0.59
Efnb3O35393 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Efnb3O35393 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Efnb3O35393 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Efnb3O35393 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms