Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.39■□□□□ 0.05
Cpsf2O35218 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Gm16026-204ENSMUST00000162652 683 ntBASIC15.39■□□□□ 0.05
Cpsf2O35218 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.39■□□□□ 0.05
Cpsf2O35218 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.39■□□□□ 0.05
Cpsf2O35218 Olfr286-202ENSMUST00000205305 969 ntBASIC15.39■□□□□ 0.05
Cpsf2O35218 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.39■□□□□ 0.05
Cpsf2O35218 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Cpsf2O35218 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cpsf2O35218 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cpsf2O35218 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cpsf2O35218 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.38■□□□□ 0.05
Cpsf2O35218 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.38■□□□□ 0.05
Cpsf2O35218 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Cpsf2O35218 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cpsf2O35218 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Cpsf2O35218 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cpsf2O35218 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
Cpsf2O35218 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.38■□□□□ 0.05
Cpsf2O35218 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.38■□□□□ 0.05
Cpsf2O35218 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.38■□□□□ 0.05
Cpsf2O35218 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Cpsf2O35218 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cpsf2O35218 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Cpsf2O35218 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.37■□□□□ 0.05
Cpsf2O35218 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cpsf2O35218 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.37■□□□□ 0.05
Cpsf2O35218 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.37■□□□□ 0.05
Cpsf2O35218 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.37■□□□□ 0.05
Cpsf2O35218 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.37■□□□□ 0.05
Cpsf2O35218 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cpsf2O35218 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.37■□□□□ 0.05
Cpsf2O35218 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Acot6-202ENSMUST00000222921 3622 ntBASIC15.37■□□□□ 0.05
Cpsf2O35218 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cpsf2O35218 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cpsf2O35218 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Cpsf2O35218 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf2O35218 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf2O35218 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf2O35218 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf2O35218 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Cpsf2O35218 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf2O35218 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf2O35218 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf2O35218 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf2O35218 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf2O35218 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf2O35218 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cpsf2O35218 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms