Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Mir6990-201ENSMUST00000183724 91 ntBASIC13.73□□□□□ -0.21
Sh3yl1O08641 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.73□□□□□ -0.21
Sh3yl1O08641 Gm18057-201ENSMUST00000208220 503 ntBASIC13.73□□□□□ -0.21
Sh3yl1O08641 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.73□□□□□ -0.21
Sh3yl1O08641 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3yl1O08641 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.72□□□□□ -0.21
Sh3yl1O08641 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3yl1O08641 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sh3yl1O08641 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.71□□□□□ -0.21
Sh3yl1O08641 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Gm43474-201ENSMUST00000196415 774 ntBASIC13.71□□□□□ -0.21
Sh3yl1O08641 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Gm43125-201ENSMUST00000201724 730 ntBASIC13.71□□□□□ -0.21
Sh3yl1O08641 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Sh3yl1O08641 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.71□□□□□ -0.21
Sh3yl1O08641 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.71□□□□□ -0.21
Sh3yl1O08641 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.71□□□□□ -0.21
Sh3yl1O08641 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.71□□□□□ -0.21
Sh3yl1O08641 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3yl1O08641 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3yl1O08641 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.71□□□□□ -0.22
Sh3yl1O08641 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.71□□□□□ -0.22
Sh3yl1O08641 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3yl1O08641 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3yl1O08641 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3yl1O08641 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms