Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 Gm9867-201ENSMUST00000192212 2647 ntBASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcf11G3X9Z4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Gm18473-201ENSMUST00000220543 868 ntBASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcf11G3X9Z4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Gm23931-201ENSMUST00000103842 109 ntBASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Proscos-202ENSMUST00000178990 666 ntBASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Gm42442-201ENSMUST00000197951 1133 ntBASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Gm17794-201ENSMUST00000220252 955 ntBASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcf11G3X9Z4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Pcf11G3X9Z4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcf11G3X9Z4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcf11G3X9Z4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcf11G3X9Z4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.02
Pcf11G3X9Z4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pcf11G3X9Z4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 Gm12957-201ENSMUST00000117835 377 ntBASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 Gm6152-201ENSMUST00000151704 340 ntBASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 Gm29127-201ENSMUST00000188304 517 ntBASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Pcf11G3X9Z4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Gm13392-201ENSMUST00000117708 150 ntBASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Gm11814-201ENSMUST00000119515 929 ntBASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcf11G3X9Z4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms