Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Gm15483-201ENSMUST00000120338 456 ntBASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Gm10275-202ENSMUST00000168697 495 ntBASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Gm10275-201ENSMUST00000092620 635 ntBASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Pcdh9F8VPK8 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.72□□□□□ -0.05
Pcdh9F8VPK8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh9F8VPK8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh9F8VPK8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.71□□□□□ -0.06
Pcdh9F8VPK8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh9F8VPK8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.71□□□□□ -0.06
Pcdh9F8VPK8 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh9F8VPK8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Pcdh9F8VPK8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh9F8VPK8 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
Pcdh9F8VPK8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms