Protein–RNA interactions for Protein: E9Q5E2

BC005561, cDNA sequence BC005561, mousemouse

Predictions only

Length 1,589 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC005561E9Q5E2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BC005561E9Q5E2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
BC005561E9Q5E2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Gm42632-201ENSMUST00000201707 2411 ntBASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Gm12241-201ENSMUST00000118330 726 ntBASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Gm12997-201ENSMUST00000120207 640 ntBASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Gm9368-201ENSMUST00000219348 831 ntBASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
BC005561E9Q5E2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BC005561E9Q5E2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BC005561E9Q5E2 Ssr1-204ENSMUST00000225319 1610 ntBASIC21.58■■□□□ 1.05
BC005561E9Q5E2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC21.58■■□□□ 1.05
BC005561E9Q5E2 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC21.58■■□□□ 1.05
BC005561E9Q5E2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BC005561E9Q5E2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BC005561E9Q5E2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
BC005561E9Q5E2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
BC005561E9Q5E2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BC005561E9Q5E2 Carlr-201ENSMUST00000181515 2574 ntBASIC21.58■■□□□ 1.05
BC005561E9Q5E2 Gm13730-201ENSMUST00000121036 1462 ntBASIC21.58■■□□□ 1.05
BC005561E9Q5E2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BC005561E9Q5E2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC21.58■■□□□ 1.04
BC005561E9Q5E2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Gm3695-201ENSMUST00000087222 1009 ntBASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Gm42918-201ENSMUST00000199249 1580 ntBASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Gm6023-201ENSMUST00000118217 606 ntBASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
BC005561E9Q5E2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BC005561E9Q5E2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BC005561E9Q5E2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BC005561E9Q5E2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC21.56■■□□□ 1.04
BC005561E9Q5E2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BC005561E9Q5E2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC21.56■■□□□ 1.04
BC005561E9Q5E2 Gm42627-201ENSMUST00000197347 224 ntBASIC21.56■■□□□ 1.04
BC005561E9Q5E2 Rps4l-202ENSMUST00000204242 789 ntBASIC21.56■■□□□ 1.04
BC005561E9Q5E2 CT573034.1-201ENSMUST00000222983 313 ntBASIC21.56■■□□□ 1.04
BC005561E9Q5E2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BC005561E9Q5E2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BC005561E9Q5E2 Gm9109-201ENSMUST00000120254 1405 ntBASIC21.56■■□□□ 1.04
BC005561E9Q5E2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BC005561E9Q5E2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BC005561E9Q5E2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BC005561E9Q5E2 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC21.55■■□□□ 1.04
BC005561E9Q5E2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BC005561E9Q5E2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BC005561E9Q5E2 Gm3756-201ENSMUST00000169182 1355 ntBASIC21.55■■□□□ 1.04
BC005561E9Q5E2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BC005561E9Q5E2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC21.55■■□□□ 1.04
BC005561E9Q5E2 Mir5132-201ENSMUST00000175166 71 ntBASIC21.55■■□□□ 1.04
BC005561E9Q5E2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC21.55■■□□□ 1.04
BC005561E9Q5E2 Gm9445-201ENSMUST00000207454 1285 ntBASIC21.55■■□□□ 1.04
BC005561E9Q5E2 n-R5s195-201ENSMUST00000082891 119 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms