Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Gm43133-201ENSMUST00000197472 463 ntBASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hfm1D3Z4R1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hfm1D3Z4R1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hfm1D3Z4R1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hfm1D3Z4R1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hfm1D3Z4R1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hfm1D3Z4R1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Hfm1D3Z4R1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.83■□□□□ 0.77
Hfm1D3Z4R1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hfm1D3Z4R1 Gm13730-201ENSMUST00000121036 1462 ntBASIC19.83■□□□□ 0.77
Hfm1D3Z4R1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Gm7619-201ENSMUST00000210649 1282 ntBASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hfm1D3Z4R1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Gm42632-201ENSMUST00000201707 2411 ntBASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hfm1D3Z4R1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Rn7s1-201ENSMUST00000174924 300 ntBASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Rn7s2-201ENSMUST00000175032 300 ntBASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Gm26461-201ENSMUST00000175064 290 ntBASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Cts7-204ENSMUST00000225321 1257 ntBASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hfm1D3Z4R1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms