Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Gm44397-201ENSMUST00000195950 113 ntBASIC11.51□□□□□ -0.57
Chd6A3KFM7 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.51□□□□□ -0.57
Chd6A3KFM7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.51□□□□□ -0.57
Chd6A3KFM7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd6A3KFM7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.5□□□□□ -0.57
Chd6A3KFM7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.5□□□□□ -0.57
Chd6A3KFM7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.5□□□□□ -0.57
Chd6A3KFM7 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.5□□□□□ -0.57
Chd6A3KFM7 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.5□□□□□ -0.57
Chd6A3KFM7 Gm5070-201ENSMUST00000177599 862 ntBASIC11.5□□□□□ -0.57
Chd6A3KFM7 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.5□□□□□ -0.57
Chd6A3KFM7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.5□□□□□ -0.57
Chd6A3KFM7 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chd6A3KFM7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Gm29340-201ENSMUST00000188763 3854 ntBASIC11.49□□□□□ -0.57
Chd6A3KFM7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Gm13216-201ENSMUST00000117145 591 ntBASIC11.49□□□□□ -0.57
Chd6A3KFM7 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.49□□□□□ -0.57
Chd6A3KFM7 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.49□□□□□ -0.57
Chd6A3KFM7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.49□□□□□ -0.57
Chd6A3KFM7 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chd6A3KFM7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms