Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Gm7775-201ENSMUST00000218871 853 ntBASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Carlr-201ENSMUST00000181515 2574 ntBASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap99A0A140LIX9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap99A0A140LIX9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap99A0A140LIX9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms