Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm8655-201ENSMUST00000221159 852 ntBASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 AC108846.1-201ENSMUST00000214531 513 ntBASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav3n-3A0A0G2JEM0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3n-3A0A0G2JEM0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav3n-3A0A0G2JEM0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms