Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Gm18733-201ENSMUST00000173950 856 ntBASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Gm2272-201ENSMUST00000194903 582 ntBASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Gm7461-201ENSMUST00000058918 827 ntBASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Gm10154-201ENSMUST00000084445 354 ntBASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Gm13464-201ENSMUST00000119418 935 ntBASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav5-4A0A075B652 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Gm8749-201ENSMUST00000117737 331 ntBASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav5-4A0A075B652 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms