Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Mrpl40Q9Z2Q5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mrpl40Q9Z2Q5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mrpl40Q9Z2Q5 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mrpl40Q9Z2Q5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mrpl40Q9Z2Q5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm22065-201ENSMUST00000103753 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm22066-201ENSMUST00000103761 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm24932-201ENSMUST00000103763 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm24115-201ENSMUST00000103799 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm22190-201ENSMUST00000103827 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm22191-201ENSMUST00000103831 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm24721-201ENSMUST00000103849 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm28018-201ENSMUST00000103869 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm26399-201ENSMUST00000103937 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm11543-201ENSMUST00000120758 370 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm25349-201ENSMUST00000177728 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm23616-201ENSMUST00000177797 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm25871-201ENSMUST00000177816 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm24752-201ENSMUST00000178240 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm24496-201ENSMUST00000178287 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm25649-201ENSMUST00000178476 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm25548-201ENSMUST00000178681 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm23147-201ENSMUST00000178841 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm26095-201ENSMUST00000179270 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm22171-201ENSMUST00000179283 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm23936-201ENSMUST00000179354 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm22619-201ENSMUST00000179516 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm25255-201ENSMUST00000179579 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm24755-201ENSMUST00000179691 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm26506-201ENSMUST00000179692 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm25086-201ENSMUST00000179931 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm23243-201ENSMUST00000180047 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm24659-201ENSMUST00000180212 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm24169-201ENSMUST00000180244 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm23689-201ENSMUST00000180354 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm27359-201ENSMUST00000184153 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm27785-201ENSMUST00000184268 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm27466-201ENSMUST00000184396 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm27703-201ENSMUST00000184836 110 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Mrpl40Q9Z2Q5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Gm27321-201ENSMUST00000185021 205 ntBASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Mrpl40Q9Z2Q5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms