Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Upk1bQ9Z2C6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Upk1bQ9Z2C6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk1bQ9Z2C6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upk1bQ9Z2C6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Upk1bQ9Z2C6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upk1bQ9Z2C6 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Gm7222-201ENSMUST00000117512 906 ntBASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Gm11764-201ENSMUST00000120221 623 ntBASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
Upk1bQ9Z2C6 Gm8584-201ENSMUST00000171982 758 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms